Suggest_Tree Analysis Command FAQ
Overview
This FAQ contains information related to using the online Suggest Tree Analysis Command function. Please direct all corrections and additions to RDP-II General Support (rdpstaff@msu.edu). This FAQ can be found on the Web at http://www.cme.msu.edu/RDP/docs/suggest_tree_faq.html. Information in this FAQ is primarily based on e-mail received via the RDP-II Support page linked at the bottom of the analysis form.
    Frequently Asked Questions
  1. Q: What does Suggest_tree do?
    A: Suggest_tree takes an unknown rRNA sequence and suggests a placement for it on one of the predetermined RDP phylogenetic trees. Suggest_tree is currently only available at the old Illinois site.

  2. Q: How do I go about generating a phylogenetic tree for an organism. I can pull 16S sequence from genbank
    A: A very complete answer is given in the General FAQ file. This answer discusses tree building in general terms without using the Suggest_tree analysis command specifically.


Last updated on 09/10/1999.